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Written by Administrator
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We have developped GensearchHIV-LIGHT, a simplified version of GensearchHIV: it allows to apply the public ANRS algorithms to a fasta file of the sample.
A download of the demo version is available here.
You most likely need administrator rights on your PC.
The work process is following:
- Select the gene in the 'STEP 1' window from the 'Files' tab

- Push the 'GO' button from 'STEP3'

- Push 'Import nt seq' in the 'Reporting and saving'

- Select your file in FASTA format

- Check your mutations: if a codon is degenerated and codes for two different amino acids, the software will automatically use both, if there are more than 2 amino acids possible, Gensearch will mark the locations with a '?' and you have to select two of them. When finished checking, click on 'Finalise / Save'

- Fill out the information for the report and click on 'Print HIV Report' to generate it

- Here is the report of the algorithms analysis, printable and saveable as PDF.

To switch gene, go back to the 'File' tab and to step 1.
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