LSDB software

You can find here several software packages developed by researchers that you might find useful for managing genetic variants in LSDBs. Please read the associated terms of use thoroughly before downloading and installing.

Leiden Open Variation Database

LOVD stands for Leiden Open (source) Variation Database.
LOVD's purpose : To provide a flexible, freely available tool for gene-centered collection and display of DNA variations.


Compatible with our sequencing software Gensearch.

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UMD

It was developed as a generic software to create locus-specific databases (LSDBs) with the 4th Dimension® package from 4D. The UMD software includes an optimized structure to assist and secure data entry and to allow the input of a wide range of clinical data.


Compatible with our sequencing software Gensearch.

 896
Cafe Variome

 

Cafe Variome should not be thought as a database but instead as a 'shop window' for what exists in various data sources. It is designed to enable users to ask the question 'where can certain data be found?', seeking to access those data under one of three models, as stipulated by the data submitter:

The new system is simple to install, and can be deployed in a number of ways:

  • On a users server, for example to share data between a network of labs
  • Hosted by the Cafe Variome team.

Compatible with our sequencing software Gensearch and GensearchNGS.

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